Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
Falk Warnecke, Peter Luginbuhl, Natalia Ivanova, Majid Ghassemian, Toby H. Richardson, Justin T. Stege, Michelle Cayouette, Alice C. McHardy, Gordana Djordjevic, Nahla Aboushadi, Rotem Sorek, Susannah G. Tringe, Mircea Podar, Hector Garcia Martin, Victor Kunin, Daniel Dalevi, Julita Madejska, Edward Kirton, Darren Platt, Ernest Szeto, Asaf Salamov, Kerrie Barry, Natalia Mikhailova, Nikos C. Kyrpides, Eric G. Matson, Elizabeth A. Ottesen, Xinning Zhang, Myriam Hernandez, Catalina Murillo, Luis G. Acosta, Isidore Rigoutsos, Giselle Tamayo, Brian D. Green, Cathy Chang, Edward M. Rubin, Eric J. Mathur, Dan E. Robertson, Philip Hugenholtz & Jared R. Leadbetter
Nature, 2007
Abstract
From the standpoints of both basic research and biotechnology,
there is considerable interest in reaching a clearer understanding
of the diversity of biological mechanisms employed during lignocellulose
degradation. Globally, termites are an extremely successful
group of wood-degrading organisms1 and are therefore
important both for their roles in carbon turnover in the environment
and as potential sources of biochemical catalysts for
efforts aimed at converting wood into biofuels. Only recently have
data supported any direct role for the symbiotic bacteria in the gut
of the termite in cellulose and xylan hydrolysis2. Here we use a
metagenomic analysis of the bacterial community resident in the
hindgut paunch of a wood-feeding ‘higher’ Nasutitermes species
(which do not contain cellulose-fermenting protozoa) to show the
presence of a large, diverse set of bacterial genes for cellulose and
xylan hydrolysis. Many of these genes were expressed in vivo or had
cellulase activity in vitro, and further analyses implicate spirochete
and fibrobacter species in gut lignocellulose degradation. New
insights into other important symbiotic functions including H2
metabolism, CO2-reductive acetogenesis and N2 fixation are also
provided by this first system-wide gene analysis of a microbial community
specialized towards plant lignocellulose degradation. Our
results underscore how complex even a 1-ul environment can be.
NOTE: the article text supplied here is for educational purposes only.
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